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BigNASim
Entry: NAFlex_TEST_HOSP
Nucleic Acid Data:
Sequence
GCAGAAACAGCUCUGCGC
Rev. Sequence
GCGCAGAGCUGUUUCUGC
Type
SubType
Chains
Pdb
-
Ligands
Keywords
MD Simulation >>
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Simulation Metadata
Force Field
parmBSC1
Simulation Date
0.00000000 1664841600
Simulated Time
-
Time Step
Parts
-
Temperature
K
Water
Additional Solvent
Counter Ions
Ionic Concentration
-
Additional Ions
Additional Molecules
Ions Parameters
Unified Molecular Modeling (UMM) Metadata
(Click to see
full
UMM)
Simulation Metadata (UMM)
Author
.
IonicConcentration
-
Parts
-
Temperature
K
_id
NAFlex_TEST_HOSP
boxAngle
109.471219
boxX
82.5157479
boxY
82.5157479
boxZ
82.5157479
dataset
Array
date
0.00000000 1664841600
description
forceField
parmBSC0+OL3
ionsModel
-
moleculeType
Rna
rev_sequence
GCGCAGAGCUGUUUCUGC
saltConcentration
-
sequence
GCAGAAACAGCUCUGCGC
soluteAtoms
1154
soluteCharge
-34
soluteResidues
36
solventAtoms
-
solventResidues
-
time
-
totalAtoms
1154
totalCharge
-34
totalIons
-
totalResidues
36
Quality Control
RMSd
-
Rgyr
-
SASA
-
RMSf
-
Trajectory Analyses >>
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